../../tmp/servers/virsirnadb/984569121
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1928 | 1 | cggacacacaaaaagaaag | 19 | |
| AF272001.1 | Zaire Ebola virus strain Mayinga, complete genome | 1 | ................... | 19 | 100 |
| AF272001.1 | Zaire Ebola virus strain Mayinga, complete genome | 18958 | _.............ag... | 18941 | 84 |
| AF272001.1 | Zaire Ebola virus strain Mayinga, complete genome | 13381 | ________........... | 13391 | 57 |
| AF272001.1 | Zaire Ebola virus strain Mayinga, complete genome | 8756 | .t.t.........._____ | 8743 | 63 |
| AF272001.1 | Zaire Ebola virus strain Mayinga, complete genome | 18912 | ____.........._____ | 18921 | 52 |
| AF272001.1 | Zaire Ebola virus strain Mayinga, complete genome | 44 | ____.........______ | 36 | 47 |
| AF272001.1 | Zaire Ebola virus strain Mayinga, complete genome | 2316 | __________......... | 2324 | 47 |
| AF272001.1 | Zaire Ebola virus strain Mayinga, complete genome | 3969 | _______.........___ | 3977 | 47 |
| AF499101.1 | Zaire Ebola virus strain Mayinga, complete genome | 1 | ................... | 19 | 100 |
| AF499101.1 | Zaire Ebola virus strain Mayinga, complete genome | 18959 | _.............ag... | 18942 | 84 |
| AF499101.1 | Zaire Ebola virus strain Mayinga, complete genome | 13382 | ________........... | 13392 | 57 |
| AF499101.1 | Zaire Ebola virus strain Mayinga, complete genome | 8756 | .t.t.........._____ | 8743 | 63 |
| AF499101.1 | Zaire Ebola virus strain Mayinga, complete genome | 18913 | ____.........._____ | 18922 | 52 |
| AF499101.1 | Zaire Ebola virus strain Mayinga, complete genome | 44 | ____.........______ | 36 | 47 |
| AF499101.1 | Zaire Ebola virus strain Mayinga, complete genome | 2316 | __________......... | 2324 | 47 |
| AF499101.1 | Zaire Ebola virus strain Mayinga, complete genome | 3969 | _______.........___ | 3977 | 47 |
| AY142960.1 | Zaire Ebola virus strain Mayinga subtype Zaire, complete genome | 1 | ................... | 19 | 100 |
| AY142960.1 | Zaire Ebola virus strain Mayinga subtype Zaire, complete genome | 18958 | _.............ag... | 18941 | 84 |
| AY142960.1 | Zaire Ebola virus strain Mayinga subtype Zaire, complete genome | 13381 | ________........... | 13391 | 57 |
| AY142960.1 | Zaire Ebola virus strain Mayinga subtype Zaire, complete genome | 8756 | .t.t.........._____ | 8743 | 63 |
| AY142960.1 | Zaire Ebola virus strain Mayinga subtype Zaire, complete genome | 18912 | ____.........._____ | 18921 | 52 |
| AY142960.1 | Zaire Ebola virus strain Mayinga subtype Zaire, complete genome | 44 | ____.........______ | 36 | 47 |
| AY142960.1 | Zaire Ebola virus strain Mayinga subtype Zaire, complete genome | 2316 | __________......... | 2324 | 47 |
| AY142960.1 | Zaire Ebola virus strain Mayinga subtype Zaire, complete genome | 3969 | _______.........___ | 3977 | 47 |
| AY354458.1 | Zaire ebolavirus strain Zaire 1995, complete genome | 1 | ................... | 19 | 100 |
| AY354458.1 | Zaire ebolavirus strain Zaire 1995, complete genome | 18959 | _.............ag... | 18942 | 84 |
| AY354458.1 | Zaire ebolavirus strain Zaire 1995, complete genome | 13382 | ________........... | 13392 | 57 |
| AY354458.1 | Zaire ebolavirus strain Zaire 1995, complete genome | 8757 | .t.t.........._____ | 8744 | 63 |
| AY354458.1 | Zaire ebolavirus strain Zaire 1995, complete genome | 18913 | ____.........._____ | 18922 | 52 |
| AY354458.1 | Zaire ebolavirus strain Zaire 1995, complete genome | 44 | ____.........______ | 36 | 47 |
| AY354458.1 | Zaire ebolavirus strain Zaire 1995, complete genome | 3969 | _______.........___ | 3977 | 47 |
| EU224440.2 | Zaire ebolavirus strain Mayinga, complete genome | 1 | ................... | 19 | 100 |
| EU224440.2 | Zaire ebolavirus strain Mayinga, complete genome | 18958 | _.............ag... | 18941 | 84 |
| EU224440.2 | Zaire ebolavirus strain Mayinga, complete genome | 13381 | ________........... | 13391 | 57 |
| EU224440.2 | Zaire ebolavirus strain Mayinga, complete genome | 8756 | .t.t.........._____ | 8743 | 63 |
| EU224440.2 | Zaire ebolavirus strain Mayinga, complete genome | 18912 | ____.........._____ | 18921 | 52 |
| EU224440.2 | Zaire ebolavirus strain Mayinga, complete genome | 44 | ____.........______ | 36 | 47 |
| EU224440.2 | Zaire ebolavirus strain Mayinga, complete genome | 2316 | __________......... | 2324 | 47 |
| EU224440.2 | Zaire ebolavirus strain Mayinga, complete genome | 3969 | _______.........___ | 3977 | 47 |
| EU338380.1 | Sudan ebolavirus isolate EBOV-S-2004 from Sudan, complete genome | 1 | ................... | 19 | 100 |
| EU338380.1 | Sudan ebolavirus isolate EBOV-S-2004 from Sudan, complete genome | 18874 | _............._____ | 18862 | 68 |
| EU338380.1 | Sudan ebolavirus isolate EBOV-S-2004 from Sudan, complete genome | 44 | ____...........____ | 34 | 57 |
| EU338380.1 | Sudan ebolavirus isolate EBOV-S-2004 from Sudan, complete genome | 12207 | _.........c.t._____ | 12219 | 57 |
| EU338380.1 | Sudan ebolavirus isolate EBOV-S-2004 from Sudan, complete genome | 13188 | _________........._ | 13180 | 47 |
| NC_006432.1 | Sudan ebolavirus, complete genome | 1 | ................... | 19 | 100 |
| NC_006432.1 | Sudan ebolavirus, complete genome | 18874 | _............._____ | 18862 | 68 |
| NC_006432.1 | Sudan ebolavirus, complete genome | 44 | ____...........t.__ | 32 | 63 |
| NC_006432.1 | Sudan ebolavirus, complete genome | 12207 | _.........c.t._____ | 12219 | 57 |
| NC_006432.1 | Sudan ebolavirus, complete genome | 13188 | _________........._ | 13180 | 47 |
| NC_002549.1 | Zaire ebolavirus, complete genome | 1 | ................... | 19 | 100 |
| NC_002549.1 | Zaire ebolavirus, complete genome | 18958 | _.............ag... | 18941 | 84 |
| NC_002549.1 | Zaire ebolavirus, complete genome | 13381 | ________........... | 13391 | 57 |
| NC_002549.1 | Zaire ebolavirus, complete genome | 8756 | .t.t.........._____ | 8743 | 63 |
| NC_002549.1 | Zaire ebolavirus, complete genome | 18912 | ____.........._____ | 18921 | 52 |
| NC_002549.1 | Zaire ebolavirus, complete genome | 44 | ____.........______ | 36 | 47 |
| NC_002549.1 | Zaire ebolavirus, complete genome | 2316 | __________......... | 2324 | 47 |
| NC_002549.1 | Zaire ebolavirus, complete genome | 3969 | _______.........___ | 3977 | 47 |
| NC_014372.1 | Cote d'Ivoire ebolavirus | 1 | ................... | 19 | 100 |
| NC_014372.1 | Cote d'Ivoire ebolavirus | 18934 | _............._____ | 18922 | 68 |
| NC_014372.1 | Cote d'Ivoire ebolavirus | 18845 | ___..t..g........._ | 18859 | 68 |
| NC_014372.1 | Cote d'Ivoire ebolavirus | 13366 | ________........... | 13376 | 57 |
| NC_014372.1 | Cote d'Ivoire ebolavirus | 18889 | _____.........t.___ | 18899 | 52 |
| NC_014372.1 | Cote d'Ivoire ebolavirus | 1922 | ________.........__ | 1914 | 47 |
| NC_014372.1 | Cote d'Ivoire ebolavirus | 2062 | ____.........______ | 2070 | 47 |
| NC_014372.1 | Cote d'Ivoire ebolavirus | 8907 | _______.........___ | 8915 | 47 |
| NC_014372.1 | Cote d'Ivoire ebolavirus | 15753 | __________......... | 15745 | 47 |
| AY769362.1 | Reston ebolavirus strain Pennsylvania, complete genome | 1 | .................._ | 18 | 94 |
| AY769362.1 | Reston ebolavirus strain Pennsylvania, complete genome | 18894 | _..............g.._ | 18878 | 84 |
| AY769362.1 | Reston ebolavirus strain Pennsylvania, complete genome | 10282 | ____.........g...__ | 10270 | 63 |
| AY769362.1 | Reston ebolavirus strain Pennsylvania, complete genome | 44 | ____...........____ | 34 | 57 |
| AY769362.1 | Reston ebolavirus strain Pennsylvania, complete genome | 13349 | _______.........g.. | 13360 | 57 |
| AY769362.1 | Reston ebolavirus strain Pennsylvania, complete genome | 18848 | ____..........c.___ | 18859 | 57 |
| AY769362.1 | Reston ebolavirus strain Pennsylvania, complete genome | 10136 | _..gg.g.........___ | 10150 | 63 |
| NC_004161.1 | Reston ebolavirus, complete genome | 1 | .................._ | 18 | 94 |
| NC_004161.1 | Reston ebolavirus, complete genome | 18891 | _..............g.._ | 18875 | 84 |
| NC_004161.1 | Reston ebolavirus, complete genome | 10282 | ____.........g...__ | 10270 | 63 |
| NC_004161.1 | Reston ebolavirus, complete genome | 44 | ____...........____ | 34 | 57 |
| NC_004161.1 | Reston ebolavirus, complete genome | 13349 | _______.........g.. | 13360 | 57 |
| NC_004161.1 | Reston ebolavirus, complete genome | 18845 | ____..........c.___ | 18856 | 57 |
| NC_004161.1 | Reston ebolavirus, complete genome | 10136 | _..gg.g.........___ | 10150 | 63 |
| NC_014373.1 | Bundibugyo ebolavirus, complete genome | 1 | .................t. | 19 | 94 |
| NC_014373.1 | Bundibugyo ebolavirus, complete genome | 18939 | _............._____ | 18927 | 68 |
| NC_014373.1 | Bundibugyo ebolavirus, complete genome | 8743 | .t.t.........._____ | 8730 | 63 |
| NC_014373.1 | Bundibugyo ebolavirus, complete genome | 1916 | ________.........__ | 1908 | 47 |
| NC_014373.1 | Bundibugyo ebolavirus, complete genome | 8900 | _______.........___ | 8908 | 47 |
| AB050936.1 | Reston ebolavirus - Reston genomic RNA, complete genome | 18889 | _..............g.._ | 18873 | 84 |
| AB050936.1 | Reston ebolavirus - Reston genomic RNA, complete genome | 2 | _............ga..._ | 18 | 78 |
| AB050936.1 | Reston ebolavirus - Reston genomic RNA, complete genome | 10280 | ____.........g...__ | 10268 | 63 |
| AB050936.1 | Reston ebolavirus - Reston genomic RNA, complete genome | 13347 | _______.........g.. | 13358 | 57 |
| AB050936.1 | Reston ebolavirus - Reston genomic RNA, complete genome | 18843 | ____..........c.___ | 18854 | 57 |
| AB050936.1 | Reston ebolavirus - Reston genomic RNA, complete genome | 42 | ____.........._____ | 33 | 52 |